/* This file is part of OpenMalaria.
 * 
 * Copyright (C) 2005-2014 Swiss Tropical and Public Health Institute
 * Copyright (C) 2005-2014 Liverpool School Of Tropical Medicine
 * 
 * OpenMalaria is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or (at
 * your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
 */

#ifndef Hmod_LSTMPkPdModel
#define Hmod_LSTMPkPdModel

#include "PkPd/PkPdModel.h"
#include "PkPd/Drug/LSTMDrug.h"

namespace OM { namespace PkPd {
    
/** Pharmacokinetic and pharmacodynamics interface, used by each human's
 * within-host model.
 *
 * Some of the implementation is contained in the drug.h/drug.cpp files. */
class LSTMPkPdModel : public PkPdModel {
public:
  LSTMPkPdModel ();
  virtual ~LSTMPkPdModel ();
  
  virtual void checkpoint (istream& stream);
  virtual void checkpoint (ostream& stream);
  
  virtual void medicate(string drugAbbrev, double qty, double time, double duration, double bodyMass);
  virtual void decayDrugs ();
  virtual double getDrugFactor (uint32_t proteome_ID);
  
  virtual uint32_t new_proteome_ID ();
  
private:
    // Per-individual variables:
  list<LSTMDrug> _drugs;
};

} }
#endif